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Java Mage: All-Atom Contacts for a Stack of Base-pairs

Animation of base-stack contact dots, for two high-resolution crystal structures of a pair of RNA GC base pairs, in different solvent conditions. Animate in the "end" view to see changes. One structure has ideal, large stacking area and the other is wedged apart to give much less optimal stacking. From NDB files ARB004, ARB005.

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